Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2bQ8BJF9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp2bQ8BJF9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp2bQ8BJF9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.77■□□□□ 0.28
Chmp2bQ8BJF9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp2bQ8BJF9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp2bQ8BJF9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp2bQ8BJF9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp2bQ8BJF9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms