Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim6Q8BGE7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim6Q8BGE7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim6Q8BGE7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim6Q8BGE7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim6Q8BGE7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim6Q8BGE7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim6Q8BGE7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim6Q8BGE7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim6Q8BGE7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim6Q8BGE7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms