Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc18Q80WC3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Gm15427-201ENSMUST00000117288 531 ntBASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc18Q80WC3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Gm5745-201ENSMUST00000183748 313 ntBASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc18Q80WC3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnrc18Q80WC3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Gm27622-201ENSMUST00000183779 60 ntBASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc18Q80WC3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc18Q80WC3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.15■□□□□ 0.18
Tnrc18Q80WC3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms