Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.45■□□□□ 0.22
Usp8Q80U87 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.45■□□□□ 0.22
Usp8Q80U87 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Usp8Q80U87 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Usp8Q80U87 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Usp8Q80U87 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Usp8Q80U87 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.44■□□□□ 0.22
Usp8Q80U87 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Usp8Q80U87 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.43■□□□□ 0.22
Usp8Q80U87 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp8Q80U87 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp8Q80U87 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp8Q80U87 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Gm27463-201ENSMUST00000183569 57 ntBASIC16.42■□□□□ 0.22
Usp8Q80U87 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.42■□□□□ 0.22
Usp8Q80U87 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp8Q80U87 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.41■□□□□ 0.22
Usp8Q80U87 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp8Q80U87 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp8Q80U87 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Usp8Q80U87 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp8Q80U87 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms