Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Gm18421-201ENSMUST00000204122 625 ntBASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc2Q6PDG5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Gm37722-201ENSMUST00000193757 208 ntBASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Gm33142-201ENSMUST00000193913 867 ntBASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc2Q6PDG5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcc2Q6PDG5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcc2Q6PDG5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Smarcc2Q6PDG5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Gm11336-201ENSMUST00000118168 334 ntBASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcc2Q6PDG5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcc2Q6PDG5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms