Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcd3Q6P9Z1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Gm7791-201ENSMUST00000219066 539 ntBASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd3Q6P9Z1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gm22240-201ENSMUST00000175225 82 ntBASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd3Q6P9Z1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcd3Q6P9Z1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd3Q6P9Z1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms