Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Zic4Q61467 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.29□□□□□ -0.28
Zic4Q61467 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Zic4Q61467 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Zic4Q61467 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.29□□□□□ -0.28
Zic4Q61467 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Zic4Q61467 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Zic4Q61467 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Zic4Q61467 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Zic4Q61467 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Gm12382-201ENSMUST00000122005 922 ntBASIC13.28□□□□□ -0.28
Zic4Q61467 Mir5133-201ENSMUST00000174955 77 ntBASIC13.28□□□□□ -0.28
Zic4Q61467 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Zic4Q61467 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Zic4Q61467 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Zic4Q61467 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Zic4Q61467 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Zic4Q61467 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Zic4Q61467 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Zic4Q61467 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Zic4Q61467 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Zic4Q61467 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Zic4Q61467 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Gm13158-201ENSMUST00000122007 736 ntBASIC13.27□□□□□ -0.29
Zic4Q61467 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.27□□□□□ -0.29
Zic4Q61467 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
Zic4Q61467 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Zic4Q61467 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.27□□□□□ -0.29
Zic4Q61467 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.27□□□□□ -0.29
Zic4Q61467 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Zic4Q61467 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.27□□□□□ -0.29
Zic4Q61467 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Zic4Q61467 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Zic4Q61467 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Zic4Q61467 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Zic4Q61467 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms