Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.15□□□□□ -0.14
Shisa3Q3UPR0 App-207ENSMUST00000227737 2827 ntBASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Gm10252-201ENSMUST00000209541 832 ntBASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa3Q3UPR0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa3Q3UPR0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa3Q3UPR0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa3Q3UPR0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms