Protein–RNA interactions for Protein: Q3UD01

Atxn7l3b, Ataxin-7-like protein 3B, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7l3bQ3UD01 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atxn7l3bQ3UD01 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atxn7l3bQ3UD01 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Gm43799-201ENSMUST00000201845 579 ntBASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atxn7l3bQ3UD01 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atxn7l3bQ3UD01 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Atxn7l3bQ3UD01 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Atxn7l3bQ3UD01 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms