Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nhej1Q3KNJ2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nhej1Q3KNJ2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nhej1Q3KNJ2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nhej1Q3KNJ2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Phf7-203ENSMUST00000226565 1971 ntBASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Gm715-201ENSMUST00000117865 831 ntBASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nhej1Q3KNJ2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nhej1Q3KNJ2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nhej1Q3KNJ2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nhej1Q3KNJ2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nhej1Q3KNJ2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms