Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Gm11745-201ENSMUST00000121669 448 ntBASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col19a1Q0VF58 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col19a1Q0VF58 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col19a1Q0VF58 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Gm45747-201ENSMUST00000212203 999 ntBASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col19a1Q0VF58 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col19a1Q0VF58 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms