Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Gm11336-201ENSMUST00000118168 334 ntBASIC13.62□□□□□ -0.23
Pdlim4P70271 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Gm6659-201ENSMUST00000174752 547 ntBASIC13.62□□□□□ -0.23
Pdlim4P70271 Gm18115-201ENSMUST00000221209 621 ntBASIC13.62□□□□□ -0.23
Pdlim4P70271 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim4P70271 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim4P70271 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.61□□□□□ -0.23
Pdlim4P70271 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim4P70271 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim4P70271 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.6□□□□□ -0.23
Pdlim4P70271 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim4P70271 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm23634-201ENSMUST00000175071 91 ntBASIC13.6□□□□□ -0.23
Pdlim4P70271 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms