Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rab4aP56371 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
Rab4aP56371 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.97□□□□□ -0.33
Rab4aP56371 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rab4aP56371 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rab4aP56371 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rab4aP56371 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.96□□□□□ -0.33
Rab4aP56371 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rab4aP56371 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.96□□□□□ -0.33
Rab4aP56371 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.96□□□□□ -0.33
Rab4aP56371 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab4aP56371 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Rab4aP56371 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab4aP56371 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rab4aP56371 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.95□□□□□ -0.34
Rab4aP56371 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.95□□□□□ -0.34
Rab4aP56371 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.95□□□□□ -0.34
Rab4aP56371 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.95□□□□□ -0.34
Rab4aP56371 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rab4aP56371 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rab4aP56371 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Rab4aP56371 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rab4aP56371 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rab4aP56371 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rab4aP56371 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab4aP56371 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rab4aP56371 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rab4aP56371 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rab4aP56371 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rab4aP56371 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms