Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm45328-201ENSMUST00000210942 917 ntBASIC15.67■□□□□ 0.1
Cdh4P39038 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdh4P39038 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdh4P39038 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh4P39038 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdh4P39038 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Gm14859-201ENSMUST00000117752 357 ntBASIC15.65■□□□□ 0.1
Cdh4P39038 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh4P39038 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh4P39038 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cdh4P39038 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdh4P39038 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdh4P39038 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdh4P39038 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.64■□□□□ 0.09
Cdh4P39038 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.64■□□□□ 0.09
Cdh4P39038 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.64■□□□□ 0.09
Cdh4P39038 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cdh4P39038 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh4P39038 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.64■□□□□ 0.09
Cdh4P39038 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.63■□□□□ 0.09
Cdh4P39038 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdh4P39038 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdh4P39038 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cdh4P39038 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.63■□□□□ 0.09
Cdh4P39038 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 Gm7284-201ENSMUST00000131667 944 ntBASIC15.63■□□□□ 0.09
Cdh4P39038 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh4P39038 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdh4P39038 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.63■□□□□ 0.09
Cdh4P39038 Gm27704-201ENSMUST00000185094 107 ntBASIC15.63■□□□□ 0.09
Cdh4P39038 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.63■□□□□ 0.09
Cdh4P39038 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cdh4P39038 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.63■□□□□ 0.09
Cdh4P39038 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms