Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm24589-201ENSMUST00000116692 94 ntBASIC16.72■□□□□ 0.27
Rb1P13405 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rb1P13405 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rb1P13405 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rb1P13405 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rb1P13405 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rb1P13405 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rb1P13405 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rb1P13405 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rb1P13405 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.7■□□□□ 0.26
Rb1P13405 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rb1P13405 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rb1P13405 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rb1P13405 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Rb1P13405 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rb1P13405 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.7■□□□□ 0.26
Rb1P13405 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.7■□□□□ 0.26
Rb1P13405 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Mzt1-203ENSMUST00000227948 952 ntBASIC16.7■□□□□ 0.26
Rb1P13405 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Birc2-201ENSMUST00000054878 378 ntBASIC16.7■□□□□ 0.26
Rb1P13405 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rb1P13405 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rb1P13405 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Rb1P13405 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rb1P13405 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.69■□□□□ 0.26
Rb1P13405 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rb1P13405 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.69■□□□□ 0.26
Rb1P13405 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rb1P13405 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.69■□□□□ 0.26
Rb1P13405 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rb1P13405 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rb1P13405 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rb1P13405 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rb1P13405 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.68■□□□□ 0.26
Rb1P13405 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.68■□□□□ 0.26
Rb1P13405 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rb1P13405 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rb1P13405 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rb1P13405 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rb1P13405 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.68■□□□□ 0.26
Rb1P13405 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms