Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Gm1401-201ENSMUST00000122048 772 ntBASIC18.04■□□□□ 0.48
Stra6O70491 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Stra6O70491 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.04■□□□□ 0.48
Stra6O70491 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Stra6O70491 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.03■□□□□ 0.48
Stra6O70491 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.03■□□□□ 0.48
Stra6O70491 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.03■□□□□ 0.48
Stra6O70491 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Stra6O70491 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.03■□□□□ 0.48
Stra6O70491 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.03■□□□□ 0.48
Stra6O70491 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Stra6O70491 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Stra6O70491 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Stra6O70491 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Stra6O70491 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.02■□□□□ 0.48
Stra6O70491 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stra6O70491 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stra6O70491 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stra6O70491 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Stra6O70491 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.02■□□□□ 0.48
Stra6O70491 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.02■□□□□ 0.48
Stra6O70491 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.02■□□□□ 0.48
Stra6O70491 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Stra6O70491 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Stra6O70491 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Stra6O70491 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Stra6O70491 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Stra6O70491 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Stra6O70491 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Stra6O70491 Gm25990-201ENSMUST00000102440 86 ntBASIC18.01■□□□□ 0.47
Stra6O70491 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.01■□□□□ 0.47
Stra6O70491 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Gm4535-201ENSMUST00000182274 558 ntBASIC18.01■□□□□ 0.47
Stra6O70491 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.01■□□□□ 0.47
Stra6O70491 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.01■□□□□ 0.47
Stra6O70491 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Gm10355-201ENSMUST00000097146 517 ntBASIC18.01■□□□□ 0.47
Stra6O70491 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Stra6O70491 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.01■□□□□ 0.47
Stra6O70491 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Stra6O70491 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Stra6O70491 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18■□□□□ 0.47
Stra6O70491 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Stra6O70491 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18■□□□□ 0.47
Stra6O70491 Gm4459-201ENSMUST00000118750 468 ntBASIC18■□□□□ 0.47
Stra6O70491 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18■□□□□ 0.47
Stra6O70491 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18■□□□□ 0.47
Stra6O70491 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18■□□□□ 0.47
Stra6O70491 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18■□□□□ 0.47
Stra6O70491 Gm37584-201ENSMUST00000193595 1290 ntBASIC18■□□□□ 0.47
Stra6O70491 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18■□□□□ 0.47
Stra6O70491 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stra6O70491 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stra6O70491 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Stra6O70491 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms