Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Actl10-202ENSMUST00000226583 1501 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Prob1-201ENSMUST00000097619 3021 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Slc1a6O35544 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Slc1a6O35544 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.16■□□□□ 0.18
Slc1a6O35544 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc1a6O35544 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Slc1a6O35544 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc1a6O35544 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Gm12441-201ENSMUST00000121806 588 ntBASIC16.15■□□□□ 0.18
Slc1a6O35544 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Gm37856-201ENSMUST00000191634 999 ntBASIC16.15■□□□□ 0.18
Slc1a6O35544 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc1a6O35544 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Slc1a6O35544 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Slc1a6O35544 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc1a6O35544 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc1a6O35544 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Gm5643-201ENSMUST00000117081 966 ntBASIC16.14■□□□□ 0.17
Slc1a6O35544 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Trmt13-210ENSMUST00000198454 880 ntBASIC16.14■□□□□ 0.17
Slc1a6O35544 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Slc1a6O35544 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc1a6O35544 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.13■□□□□ 0.17
Slc1a6O35544 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Slc1a6O35544 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc1a6O35544 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc1a6O35544 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms