Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim34bJ3QNR8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim34bJ3QNR8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 AW822252-206ENSMUST00000208904 237 ntBASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim34bJ3QNR8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim34bJ3QNR8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim34bJ3QNR8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Gm10060-201ENSMUST00000212002 111 ntBASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34bJ3QNR8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34bJ3QNR8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim34bJ3QNR8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim34bJ3QNR8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34bJ3QNR8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms