Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Gm18115-201ENSMUST00000221209 621 ntBASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav12-1A0N8R1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Gm10653-202ENSMUST00000139570 835 ntBASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Phf7-203ENSMUST00000226565 1971 ntBASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.67□□□□□ -0.22
Trav12-1A0N8R1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Gm13168-201ENSMUST00000121771 632 ntBASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav12-1A0N8R1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms