Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhgb8A0A140LI48 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhgb8A0A140LI48 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm11539-201ENSMUST00000119837 557 ntBASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm13436-201ENSMUST00000120418 567 ntBASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhgb8A0A140LI48 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhgb8A0A140LI48 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm10231-201ENSMUST00000181584 441 ntBASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm10175-202ENSMUST00000208752 441 ntBASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhgb8A0A140LI48 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhgb8A0A140LI48 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms