Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm17661-201ENSMUST00000170317 270 ntBASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm12085-201ENSMUST00000119263 940 ntBASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Trmt13-210ENSMUST00000198454 880 ntBASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Gm12441-201ENSMUST00000121806 588 ntBASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-4A0A0G2JFX3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms