Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.25□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm7213-201ENSMUST00000215977 950 ntBASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Gm6345-202ENSMUST00000180900 204 ntBASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Mir1668-201ENSMUST00000184114 107 ntBASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-1A0A0B4J1P8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms