Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-1A0A075B699 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Gm8520-201ENSMUST00000186517 868 ntBASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-1A0A075B699 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Gm3375-201ENSMUST00000203929 796 ntBASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav9d-1A0A075B699 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-1A0A075B699 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Odf3b-204ENSMUST00000227834 930 ntBASIC12.63□□□□□ -0.39
Trav9d-1A0A075B699 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms