Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.04□□□□□ -0.32
Trav17A0A075B655 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Gm18958-201ENSMUST00000174258 762 ntBASIC13.04□□□□□ -0.32
Trav17A0A075B655 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.04□□□□□ -0.32
Trav17A0A075B655 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav17A0A075B655 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm37179-201ENSMUST00000194862 823 ntBASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm43183-201ENSMUST00000200632 547 ntBASIC13.03□□□□□ -0.32
Trav17A0A075B655 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.03□□□□□ -0.32
Trav17A0A075B655 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav17A0A075B655 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms