Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav5-4A0A075B652 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Gm5417-201ENSMUST00000079706 384 ntBASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms