Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 Z98742.3-201ENST00000418637 326 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 RPS12P2-201ENST00000439728 269 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 SNORA31.1-201ENST00000515993 133 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 SNORA31.5-201ENST00000516190 133 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AP000873.5-201ENST00000533906 236 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC009063.1-201ENST00000563342 702 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 MIR5092-201ENST00000583139 88 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC009977.1-201ENST00000586015 570 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC005021.1-201ENST00000608730 355 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.97
SCN10AQ9Y5Y9 RNU6-666P-201ENST00000363499 107 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 BX276092.3-201ENST00000424182 230 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 MRPL50P4-201ENST00000446432 475 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC012181.1-201ENST00000479895 423 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 Y_RNA.673-201ENST00000516306 88 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 RN7SKP234-201ENST00000517173 224 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL442163.2-201ENST00000553912 710 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL158827.2-201ENST00000602494 330 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AP003117.1-201ENST00000602771 554 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL392112.1-201ENST00000605115 829 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC090425.2-201ENST00000608818 501 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC092184.1-201ENST00000625042 715 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AL691447.3-201ENST00000635020 330 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC069528.2-201ENST00000624849 1991 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 AC009487.2-201ENST00000420969 6821 ntBASIC2.71□□□□□ -1.98
SCN10AQ9Y5Y9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 HMGN2P3-201ENST00000433603 273 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 HMGN2P5-201ENST00000436882 273 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 HMGB1P18-201ENST00000438801 619 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AL353705.4-201ENST00000449661 238 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC147055.1-201ENST00000509261 750 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC008716.1-201ENST00000511084 513 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC093331.1-201ENST00000521474 169 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 SNRPGP15-201ENST00000600149 222 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC012119.1-201ENST00000603184 222 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 MTND5P3-201ENST00000438536 1800 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC011978.2-201ENST00000569835 2054 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 DNAJC19P6-201ENST00000401853 280 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 ST13P20-201ENST00000447996 1065 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RPL31P20-201ENST00000449593 360 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RPL9P32-201ENST00000464118 620 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 RPL36AP51-201ENST00000487216 318 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 CCNHP1-201ENST00000513311 678 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 CKS1BP7-201ENST00000522230 235 ntBASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN10AQ9Y5Y9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AC010733.2-201ENST00000589496 5702 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 SNORA7.2-201ENST00000364446 145 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 OR51A3P-201ENST00000413596 924 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AL137014.1-201ENST00000420490 1226 ntBASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN10AQ9Y5Y9 UBE2V2P1-201ENST00000434717 398 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms