Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 MAPK10-372ENST00000641954 3413 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 ZNF833P-201ENST00000424938 1494 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 AL390862.1-201ENST00000635467 1469 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.04□□□□□ -1.76
SNX9Q9Y5X1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 RPS4XP5-202ENST00000449995 1334 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SNORA62.3-201ENST00000365110 153 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SNORD116-4-201ENST00000384733 96 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 RPL23AP29-201ENST00000397284 453 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 CYCSP45-201ENST00000402289 315 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 RN7SKP27-201ENST00000410684 333 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 ZNF885P-201ENST00000420174 1098 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL035407.1-201ENST00000429211 571 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL589823.1-201ENST00000429577 183 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC018644.1-201ENST00000429934 551 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC244035.1-201ENST00000430042 390 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 Z95327.1-201ENST00000446082 482 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC009961.3-201ENST00000449832 765 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SETP14-201ENST00000497538 873 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 MTND5P13-201ENST00000513046 1079 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 MTCO1P30-201ENST00000515244 580 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 RN7SKP277-201ENST00000516895 283 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SOD1P3-201ENST00000518682 454 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC008802.1-201ENST00000519121 791 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC007991.1-201ENST00000522680 631 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL389895.1-201ENST00000554127 252 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC006270.2-201ENST00000578523 652 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 MIR5187-201ENST00000583479 76 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL031985.2-201ENST00000600955 480 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL049634.3-201ENST00000604968 457 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL391497.1-201ENST00000608671 547 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AP001521.1-201ENST00000609150 300 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC039056.2-201ENST00000622261 511 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC098679.5-201ENST00000624394 571 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC066616.2-201ENST00000559334 1481 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AL390237.1-201ENST00000404226 1415 ntBASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
SNX9Q9Y5X1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 SNORD3H-201ENST00000384486 214 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 MIR506-201ENST00000384998 124 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 SOD2P1-201ENST00000396543 562 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AL121978.1-201ENST00000402778 359 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 MIR1284-201ENST00000408337 120 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC009237.5-201ENST00000414271 501 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 NPM1P11-201ENST00000417106 855 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC017083.1-201ENST00000428093 483 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 MTCO3P5-201ENST00000433620 714 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AL590103.1-201ENST00000434488 307 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC129850.1-201ENST00000436203 508 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 HMGN2P21-201ENST00000447764 270 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 BX276092.4-201ENST00000452056 248 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 TRGVB-201ENST00000453257 471 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AP000893.1-201ENST00000474462 794 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 AL024509.2-201ENST00000493462 493 ntBASIC4.02□□□□□ -1.77
SNX9Q9Y5X1 UBE2CP3-201ENST00000502715 450 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms