Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC006390.1-201ENST00000508068 283 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC109458.1-201ENST00000508858 316 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 OR4P1P-201ENST00000530808 1136 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL139174.1-201ENST00000531489 886 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 BNIP3P26-201ENST00000600827 554 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 MTND3P19-201ENST00000603825 345 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AP001521.1-201ENST00000609150 300 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC022509.4-201ENST00000621404 572 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AL590240.3-201ENST00000621416 943 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 AC107982.1-201ENST00000507171 1300 ntBASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA1Q9Y5H4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 NACA3P-201ENST00000359690 648 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 RNA5SP50-201ENST00000363731 107 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU4-92P-201ENST00000363783 136 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-560P-201ENST00000364007 108 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 DEFB109C-201ENST00000382575 264 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 DEFB109B-201ENST00000382656 264 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 SNORD51-201ENST00000384320 80 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR591-201ENST00000385290 95 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 U3.29-201ENST00000391296 212 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 CYCSP45-201ENST00000402289 315 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 VN1R25P-201ENST00000443385 738 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 UBDP1-202ENST00000457888 382 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 RN7SL807P-201ENST00000470923 297 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 ST13P14-201ENST00000474095 734 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC026784.1-201ENST00000507986 352 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC008837.2-201ENST00000513076 418 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AP001636.2-201ENST00000525517 696 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC005832.3-201ENST00000537929 631 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC023813.2-201ENST00000564321 469 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC007599.1-201ENST00000568688 1174 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC010591.1-201ENST00000603941 649 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC018755.4-201ENST00000619715 454 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AL360181.4-201ENST00000621752 134 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 MIR3651-201ENST00000630427 90 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 AC109315.1-201ENST00000584143 1347 ntBASIC3.64□□□□□ -1.83
PCDHGA1Q9Y5H4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 CDR1-202ENST00000625883 1485 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU5D-1-201ENST00000363299 116 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RNA5SP322-201ENST00000363617 119 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU6-657P-201ENST00000383904 107 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 ARF4P3-201ENST00000397387 509 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RNU2-15P-201ENST00000410692 191 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 RPL21P109-201ENST00000422213 475 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 DUTP6-201ENST00000425573 462 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 MTND4LP10-201ENST00000435146 291 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AL121871.1-201ENST00000443413 436 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 SUMO2P2-201ENST00000456482 255 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 SNORA59A-201ENST00000459326 152 ntBASIC3.63□□□□□ -1.83
PCDHGA1Q9Y5H4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms