Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC010301.1-201ENST00000473936 355 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 SNORA74D-201ENST00000516404 141 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 ADAM3B-201ENST00000569937 840 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AC010653.1-201ENST00000571108 881 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AC017100.2-201ENST00000584628 355 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 BDH2P1-201ENST00000602288 736 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AL020991.1-201ENST00000612314 373 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 STMN1P1-201ENST00000617809 440 ntBASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
HDGFL3Q9Y3E1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 MIR26A1-201ENST00000362205 77 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 RNU6-263P-201ENST00000363811 107 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 RNU6-761P-201ENST00000384148 107 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ZNF734P-201ENST00000419494 1534 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 RFESDP1-201ENST00000422350 461 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC233728.2-201ENST00000425348 757 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AL513043.1-201ENST00000439124 535 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 XKRY2-201ENST00000442362 1093 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 RPL37P4-201ENST00000448908 268 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC008565.1-201ENST00000509046 885 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 CIR1P1-201ENST00000524055 1133 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC083760.1-201ENST00000589621 670 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AL669831.4-202ENST00000590817 238 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC113368.1-201ENST00000603736 382 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC131902.3-201ENST00000611767 581 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AL359198.2-201ENST00000611836 194 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC068831.7-201ENST00000616954 363 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 AL356118.1-201ENST00000635272 1078 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
HDGFL3Q9Y3E1 ZNF833P-201ENST00000424938 1494 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL645568.2-201ENST00000432815 1337 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 RPL9P7-201ENST00000330965 580 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 MT-TC-201ENST00000387405 66 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 MTND4P13-201ENST00000402078 1023 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 RNU6-1077P-201ENST00000410506 102 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC092745.2-202ENST00000411880 369 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 RAD23BP2-201ENST00000416003 1207 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL645937.1-202ENST00000421799 937 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL590639.1-201ENST00000456484 337 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL136126.1-201ENST00000473603 402 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 RPS29P26-201ENST00000477483 171 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC083923.1-201ENST00000523708 376 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AP003385.6-201ENST00000531603 374 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC012414.2-201ENST00000559474 187 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 MIR3200-201ENST00000580767 85 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 SNORD84-203ENST00000584275 78 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC006504.3-201ENST00000586818 523 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC023043.3-201ENST00000593113 385 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC004775.1-201ENST00000607389 753 ntBASIC2.54□□□□□ -2
HDGFL3Q9Y3E1 AC006111.3-201ENST00000622137 383 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms