Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RPL7P5-201ENST00000471472 736 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RN7SL429P-201ENST00000479090 223 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RN7SL489P-201ENST00000486185 223 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RN7SL327P-201ENST00000488659 223 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC104057.1-201ENST00000515547 497 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC027309.2-201ENST00000520566 192 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC025918.2-201ENST00000558683 763 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC116312.1-201ENST00000606841 314 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AL451074.6-201ENST00000608512 729 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 MIR7106-201ENST00000612419 65 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 RN7SL853P-201ENST00000617250 223 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AL162233.1-201ENST00000620014 944 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC084035.1-201ENST00000634543 607 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 AC110774.1-201ENST00000623567 2018 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTNNA3Q9UI47 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CTNNA3Q9UI47 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 RNA5SP27-201ENST00000363839 119 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 SNORD67-201ENST00000390833 111 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 SAR1AP2-201ENST00000392696 594 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 RNA5SP274-201ENST00000410484 108 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 PNRC2P1-201ENST00000423940 420 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 RPL21P40-201ENST00000428586 483 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC010881.1-201ENST00000433830 235 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 RABEPKP1-201ENST00000440529 1026 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 MTND1P33-201ENST00000446251 917 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC006445.1-201ENST00000491925 405 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC034105.3-201ENST00000565294 442 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 DPRXP5-201ENST00000604662 539 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 AC093732.2-201ENST00000607950 274 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 VIS1.1-201ENST00000610517 203 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 MTND5P7-201ENST00000413558 1798 ntBASIC3.65□□□□□ -1.83
CTNNA3Q9UI47 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 ANKRD36P1-201ENST00000344424 659 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 MIR22-201ENST00000362190 85 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 RNU6-1151P-201ENST00000384684 107 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 RPL5P18-201ENST00000406671 891 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 ARL2BPP3-201ENST00000421226 480 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC093151.1-201ENST00000427711 313 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC073508.1-201ENST00000428866 656 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC011242.1-201ENST00000433596 1158 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 TRIM60P18-201ENST00000441518 828 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC140076.1-201ENST00000449897 361 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC006483.1-201ENST00000487308 313 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 PSMA2P1-201ENST00000526365 646 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC018755.4-201ENST00000619715 454 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AC092650.2-201ENST00000619984 902 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AL645568.2-201ENST00000432815 1337 ntBASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CTNNA3Q9UI47 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 OR5T3-201ENST00000303059 1023 ntBASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 RNVU1-3-201ENST00000364313 161 ntBASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 SNORA46-201ENST00000384762 135 ntBASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 AL353692.2-201ENST00000407054 335 ntBASIC3.63□□□□□ -1.83
CTNNA3Q9UI47 MRPL50P2-201ENST00000416821 482 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms