Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP374-201ENST00000362939 125 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RNU6-335P-201ENST00000364563 113 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RNU6-1300P-201ENST00000391046 108 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RNA5SP56-201ENST00000410277 118 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RNA5SP229-201ENST00000410809 99 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 MTCO3P1-205ENST00000422088 832 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AL353678.1-201ENST00000422735 741 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AL035410.1-201ENST00000427409 427 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 MTCO1P3-201ENST00000429327 192 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AL353705.1-201ENST00000433468 480 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RPL21P112-201ENST00000434403 463 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 COX6CP18-201ENST00000448769 222 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 RPL12P26-201ENST00000452430 487 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 snoU13.24-201ENST00000458998 104 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC021205.2-201ENST00000480069 347 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC079203.1-201ENST00000487972 404 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC020893.1-201ENST00000502452 580 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 KLRA1P-201ENST00000503499 986 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC093331.1-201ENST00000521474 169 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 HIGD1AP10-201ENST00000527837 282 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 GTF2IP8-201ENST00000560687 584 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AC112220.2-201ENST00000605513 533 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 AF129408.1-201ENST00000608767 431 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 ZNF663P-202ENST00000641770 1131 ntBASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CLCF1Q9UBD9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CLCF1Q9UBD9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.9□□□□□ -1.94
CLCF1Q9UBD9 AP001148.1-201ENST00000624124 2359 ntBASIC2.9□□□□□ -1.94
CLCF1Q9UBD9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.94
CLCF1Q9UBD9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CLCF1Q9UBD9 SNORA7.2-201ENST00000364446 145 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 RNU6-707P-201ENST00000364647 95 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 SUGT1P1-201ENST00000379514 476 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 RNU6-224P-201ENST00000384055 107 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 RPL31P1-201ENST00000398116 372 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 MTND4LP20-201ENST00000402379 270 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC092634.6-201ENST00000418558 192 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 RPS15AP6-201ENST00000420703 385 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 C1DP1-201ENST00000426049 402 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 MTCO1P48-201ENST00000448024 1096 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL136126.1-201ENST00000473603 402 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 RPL31P13-201ENST00000484151 370 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 PCBP2P3-201ENST00000509726 843 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 SNORA48.10-201ENST00000516965 160 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL022067.1-201ENST00000602426 454 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC007687.1-201ENST00000602704 304 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AL365503.1-201ENST00000605247 905 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC005000.2-201ENST00000605468 310 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC124312.4-201ENST00000605533 310 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC073968.1-201ENST00000618594 637 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC004808.1-201ENST00000627671 721 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 AC005183.1-201ENST00000603687 1979 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 Z99496.1-201ENST00000469424 1477 ntBASIC2.9□□□□□ -1.95
CLCF1Q9UBD9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCF1Q9UBD9 AC058791.1-201ENST00000608412 3198 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms