Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 U3.29-201ENST00000391296 212 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 COX6B1P1-201ENST00000415962 213 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 RPL30P3-201ENST00000424262 333 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 ATP5JP1-201ENST00000431631 322 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC006466.1-201ENST00000438721 289 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC112498.1-201ENST00000444401 332 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 RAC1P7-201ENST00000445367 377 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC140076.1-201ENST00000449897 361 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 NANOGP10-201ENST00000453325 895 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 RNU7-63P-201ENST00000459054 62 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC233702.1-201ENST00000482905 502 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 RPS23P1-201ENST00000491662 432 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL139099.1-201ENST00000497398 403 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 GAPDHP56-201ENST00000506031 988 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 PCBP2P3-201ENST00000509726 843 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC010486.1-201ENST00000511793 424 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC005798.1-201ENST00000513715 387 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 ENPP7P9-201ENST00000514456 627 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 ARL2BPP2-201ENST00000550907 489 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 EDDM3DP-201ENST00000554692 434 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 MIR4480-201ENST00000582492 71 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC020910.3-201ENST00000603701 874 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC007497.1-201ENST00000610421 561 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL354950.2-201ENST00000617939 290 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC007742.2-201ENST00000618226 398 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AL136221.1-201ENST00000621449 509 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 CR381572.2-201ENST00000624852 397 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 AC009643.2-201ENST00000603543 1448 ntBASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
KCMF1Q9P0J7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RN7SKP224-201ENST00000364140 325 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RNU4-76P-201ENST00000364509 141 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 Y_RNA.529-201ENST00000384586 119 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 Y_RNA.535-201ENST00000384612 99 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 MIR19A-201ENST00000384878 82 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RPL12P46-201ENST00000436610 195 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC093156.1-201ENST00000440382 670 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC091685.2-201ENST00000454924 864 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RPS20P24-201ENST00000457473 361 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL591473.1-201ENST00000464297 313 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL049714.1-201ENST00000466686 347 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RNU6-27P-201ENST00000516146 107 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC021006.3-201ENST00000530771 192 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL451044.1-201ENST00000604867 238 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 FAM25E-202ENST00000608562 189 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC245517.5-201ENST00000611529 162 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC087385.3-201ENST00000620477 187 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC091925.2-201ENST00000625059 256 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC100810.6-201ENST00000638068 285 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AC093535.2-201ENST00000624769 2326 ntBASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
KCMF1Q9P0J7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms