Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AL022311.1-201ENST00000623726 19416 ntBASIC5.95□□□□□ -1.46
ATG3Q9NT62 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 RNF6P1-201ENST00000444889 1784 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 OR5J1P-201ENST00000313544 939 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 SUGT1P1-201ENST00000379514 476 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 RNU6-196P-201ENST00000384315 107 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 MIR568-201ENST00000385036 95 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL162578.1-201ENST00000406202 378 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL450338.1-201ENST00000407987 512 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 SPA17P1-201ENST00000416656 452 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC113618.1-201ENST00000416747 285 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC073335.1-201ENST00000427776 363 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC133104.1-201ENST00000429100 218 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 OR4C10P-201ENST00000434991 931 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 SEPT14P3-201ENST00000439401 183 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL732372.2-207ENST00000445840 183 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 NDUFA5P7-201ENST00000452914 242 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 SEPT14P2-201ENST00000453405 183 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 BX248409.1-201ENST00000455497 255 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC245028.2-201ENST00000458673 253 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 RNU6-1218P-201ENST00000458990 108 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC090096.1-201ENST00000489168 390 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC048346.1-201ENST00000510247 144 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 SEPT14P4-201ENST00000513445 186 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 MRPL49P2-201ENST00000521066 465 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 FO082796.1-201ENST00000523795 183 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 COX6CP5-201ENST00000527162 228 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC110588.1-201ENST00000559699 137 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 NRBF2P1-201ENST00000587407 859 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC004908.2-201ENST00000609090 574 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AC015908.5-201ENST00000623289 343 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 GVINP1-202ENST00000531871 7271 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG3Q9NT62 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 CKAP2P1-201ENST00000555477 2049 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG3Q9NT62 AL031119.1-201ENST00000404707 1879 ntBASIC5.94□□□□□ -1.46
ATG3Q9NT62 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 RNU6-1309P-201ENST00000363305 108 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RNU1-130P-201ENST00000363930 160 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 Y_RNA.315-201ENST00000365117 102 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RNU6-317P-201ENST00000384031 107 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 Z98745.1-201ENST00000402553 494 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 VN1R8P-201ENST00000407739 893 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC245054.2-201ENST00000415639 319 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC083875.1-201ENST00000419509 405 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 MTCYBP8-201ENST00000422855 651 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RGS17P1-201ENST00000423358 553 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RPS24P8-201ENST00000431490 402 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RPL36AP53-201ENST00000432891 316 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC236972.2-201ENST00000434979 310 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AL583843.1-201ENST00000456070 346 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 BTF3P5-201ENST00000457252 467 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 Y_RNA.631-201ENST00000459607 101 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RN7SL98P-201ENST00000462271 300 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC025164.1-201ENST00000496249 478 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG3Q9NT62 SNORA31.9-201ENST00000516429 84 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 RNU6-1261P-201ENST00000517194 104 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 OR5BN1P-201ENST00000532955 829 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 SCOCP1-201ENST00000554676 349 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 MIR544B-201ENST00000582372 78 ntBASIC5.93□□□□□ -1.46
ATG3Q9NT62 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG3Q9NT62 AC119674.1-207ENST00000641355 633 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms