Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC118658.2-201ENST00000618697 459 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SSU72Q9NP77 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SSU72Q9NP77 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.57
SSU72Q9NP77 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
SSU72Q9NP77 AC112198.2-201ENST00000426589 6996 ntBASIC5.21□□□□□ -1.57
SSU72Q9NP77 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SSU72Q9NP77 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SSU72Q9NP77 API5P2-201ENST00000397055 1498 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL445437.1-201ENST00000623157 3087 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 MTND5P30-201ENST00000452896 1731 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC090337.1-201ENST00000579651 2074 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 RNU6-179P-201ENST00000363350 107 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 RNU6-188P-201ENST00000364207 107 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 Y_RNA.576-201ENST00000384781 102 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 MT-TG-201ENST00000387429 68 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 RNA5SP487-201ENST00000410186 122 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 Y_RNA.646-201ENST00000410980 101 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 POLHP1-201ENST00000411806 470 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 RAC1P6-201ENST00000423911 575 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL139148.1-201ENST00000427122 680 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AF228730.2-201ENST00000438784 848 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 FHP1-201ENST00000442741 703 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 CYCSP51-201ENST00000443545 318 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 RPL23AP43-201ENST00000446445 471 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 BTF3P15-201ENST00000455606 336 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 RNU7-59P-201ENST00000459101 61 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC079804.1-201ENST00000461922 436 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC022034.3-201ENST00000471393 478 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 FTH1P24-201ENST00000503502 462 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 MTND4LP22-201ENST00000508209 276 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC002456.2-201ENST00000509356 380 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 RNU6-976P-201ENST00000516086 111 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 HMGB1P19-201ENST00000517578 577 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC027026.1-201ENST00000532323 742 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 HMGN2P47-201ENST00000559378 272 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC018552.1-201ENST00000562099 811 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC002310.3-201ENST00000569728 723 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC012409.4-201ENST00000612923 249 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC083806.3-201ENST00000614016 455 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL157817.1-201ENST00000614264 790 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 uc_338.11-201ENST00000619132 160 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AC025034.2-201ENST00000623264 286 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 AP000550.3-201ENST00000637734 379 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 BDP1P-201ENST00000582658 1990 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AL450345.1-202ENST00000605741 3881 ntBASIC5.21□□□□□ -1.58
SSU72Q9NP77 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSU72Q9NP77 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.21□□□□□ -1.58
SSU72Q9NP77 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC117470.1-201ENST00000381974 330 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 SNORD116-11-201ENST00000383882 92 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 RNU6-26P-201ENST00000383985 107 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 MRPL42P3-201ENST00000401492 326 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL136372.1-201ENST00000403060 228 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL035079.1-201ENST00000405210 287 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 HMGN1P24-201ENST00000412282 298 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms