Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 FAT1P1-201ENST00000406588 507 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AL023807.1-201ENST00000407932 359 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 MIR1289-1-201ENST00000408836 144 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 RPS15AP38-201ENST00000413110 372 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AL513175.2-201ENST00000422071 443 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 ATP5JP1-201ENST00000431631 322 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AL590664.1-201ENST00000448065 339 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AL359385.1-201ENST00000456509 365 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 TRBV26-201ENST00000456572 344 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 RPL30P14-201ENST00000482744 348 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 FAM60DP-201ENST00000524174 632 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 MIR4286-201ENST00000580651 93 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC106028.5-201ENST00000610332 395 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 AC106730.3-201ENST00000624568 641 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 MFSD8-245ENST00000641743 948 ntBASIC2.72□□□□□ -1.97
VCX3AQ9NNX9 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 RNU6-799P-201ENST00000363567 107 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC068538.1-201ENST00000376856 336 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 SNORD15B-201ENST00000384714 146 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 CYCSP45-201ENST00000402289 315 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 MTCO1P39-201ENST00000426148 480 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 HSFY6P-201ENST00000445573 403 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 NAP1L1P3-201ENST00000462291 880 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC034236.1-201ENST00000469891 373 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 RPS4XP6-201ENST00000477670 797 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC109471.1-201ENST00000511631 612 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 RNA5SP402-201ENST00000517148 110 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 NIFKP8-201ENST00000560500 874 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 NUTF2P8-201ENST00000604593 363 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC245100.7-201ENST00000609678 442 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 BX664608.1-201ENST00000610519 487 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 MIR6716-201ENST00000613413 80 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 MIR6875-201ENST00000617506 72 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC006249.1-201ENST00000621223 471 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC009039.2-201ENST00000624524 529 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 NUP58P1-201ENST00000502546 1738 ntBASIC2.71□□□□□ -1.98
VCX3AQ9NNX9 AC008432.1-201ENST00000615912 1320 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC090740.1-201ENST00000623193 2262 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 RNU6-628P-201ENST00000410675 107 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC122718.1-201ENST00000439448 744 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 Z96811.1-201ENST00000445880 108 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 MRPL50P4-201ENST00000446432 475 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 SBDSP1-204ENST00000453858 737 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC074386.1-201ENST00000476560 767 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 RNU6-27P-201ENST00000516146 107 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AP001804.3-201ENST00000525146 880 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 EEF1B2P4-201ENST00000551398 348 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 MIR4310-201ENST00000582950 57 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 RPL23AP78-201ENST00000599928 470 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 OR4H6P-202ENST00000603819 340 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 HSPE1P7-201ENST00000604681 321 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AC055876.5-201ENST00000605667 259 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 AL512283.1-201ENST00000606756 1384 ntBASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.7□□□□□ -1.98
VCX3AQ9NNX9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC091564.4-201ENST00000533934 2194 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RNU6-619P-201ENST00000365146 108 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RNU1-64P-201ENST00000365443 163 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms