Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP000526.1-201ENST00000603308 1388 ntBASIC4.02□□□□□ -1.77
UPF2Q9HAU5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC109315.1-201ENST00000584143 1347 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 U8.11-201ENST00000384699 133 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 U8.12-201ENST00000384701 133 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 MIR124-3-201ENST00000384866 87 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 RPL21P3-201ENST00000395517 478 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL161449.1-201ENST00000414531 1199 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC007390.1-201ENST00000415722 356 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 CYCSP4-201ENST00000429682 331 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 RPL21P110-201ENST00000433345 446 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 RPL21P134-201ENST00000453468 483 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 U8.18-201ENST00000459285 133 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC146507.2-201ENST00000460608 476 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 BET1P1-201ENST00000482276 359 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 DYNLL1P6-201ENST00000503440 264 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 RN7SKP21-201ENST00000516503 220 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 OR5D17P-201ENST00000531492 978 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL356057.1-201ENST00000533798 831 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC087465.1-201ENST00000560574 245 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC109446.2-201ENST00000567872 497 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC090312.2-201ENST00000582687 378 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC110760.3-201ENST00000598794 467 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC067959.1-201ENST00000604334 379 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC069545.1-201ENST00000605671 358 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AP003117.2-201ENST00000606010 545 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 AC245008.1-201ENST00000608123 476 ntBASIC4.01□□□□□ -1.77
UPF2Q9HAU5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF2Q9HAU5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
UPF2Q9HAU5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
UPF2Q9HAU5 RNU6-757P-201ENST00000410334 100 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 RNU4-72P-201ENST00000410754 173 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4□□□□□ -1.77
UPF2Q9HAU5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC245054.2-201ENST00000415639 319 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AL593851.1-201ENST00000426171 157 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC092017.2-201ENST00000427600 362 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC008065.1-201ENST00000428525 348 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC093155.1-201ENST00000440164 826 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC104978.1-201ENST00000449387 391 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4□□□□□ -1.77
UPF2Q9HAU5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPF2Q9HAU5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AC109471.1-201ENST00000511631 612 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 RPL7L1P13-201ENST00000511702 739 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 RN7SKP31-201ENST00000516354 278 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 RNA5SP380-201ENST00000517190 98 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC103843.2-201ENST00000530523 682 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4□□□□□ -1.77
UPF2Q9HAU5 BPTFP1-201ENST00000579209 492 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AL109653.1-201ENST00000603091 248 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 Z94722.1-201ENST00000604328 474 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC064807.4-201ENST00000607201 407 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 MIR4278-201ENST00000636094 69 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 MIR3974-201ENST00000637126 96 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 AC007671.2-201ENST00000637344 619 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
UPF2Q9HAU5 AL356274.2-201ENST00000624379 3752 ntBASIC4□□□□□ -1.77
UPF2Q9HAU5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 RNU6-839P-201ENST00000363347 108 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 RNA5SP479-201ENST00000364858 117 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 GSTA8P-201ENST00000404253 637 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 LUZP4P1-201ENST00000415420 344 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 USP9YP11-201ENST00000427537 717 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 OR2AS1P-201ENST00000427827 319 ntBASIC3.99□□□□□ -1.77
UPF2Q9HAU5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.99□□□□□ -1.77
UPF2Q9HAU5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms