Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC099336.2-201ENST00000422457 254 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 GOT2P5-201ENST00000433995 546 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 TBCAP1-201ENST00000436520 327 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL662791.1-201ENST00000441992 928 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 VN1R10P-201ENST00000447106 875 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MTCO3P11-201ENST00000455103 774 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC099560.2-201ENST00000457554 255 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 FCF1P3-201ENST00000496394 590 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC108145.1-201ENST00000503770 153 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC117522.1-201ENST00000509821 380 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 RNU6-507P-201ENST00000516045 100 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AP001646.1-201ENST00000527936 915 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 PHBP17-201ENST00000528576 541 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC104383.1-201ENST00000530297 370 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC004217.3-201ENST00000551552 878 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 SNORA59B-202ENST00000578183 701 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC110743.1-201ENST00000584870 478 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MIR548AB-201ENST00000584917 84 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC005255.1-201ENST00000593748 216 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC008945.2-201ENST00000606056 604 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL159169.3-201ENST00000608871 561 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MIR6868-201ENST00000611215 58 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 CR392039.5-201ENST00000623201 510 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MTND4P23-201ENST00000447723 1363 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MTND5P26-201ENST00000426018 1752 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL353743.4-201ENST00000422653 1547 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 TEX21P-201ENST00000447107 1476 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC022893.2-201ENST00000564832 3296 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL512646.1-201ENST00000269395 1077 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 RNU5D-1-201ENST00000363299 116 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 SNORA4.1-201ENST00000364263 144 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 snosnR66.1-201ENST00000391095 99 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 SNORD115-47-201ENST00000391226 86 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 RPL17P50-201ENST00000396131 546 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL590704.1-201ENST00000402856 794 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL450992.3-201ENST00000413192 568 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC048351.1-201ENST00000420064 602 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 ISCA1P1-201ENST00000426679 387 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC018644.1-201ENST00000429934 551 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 HMGB1P31-201ENST00000437242 427 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL031663.1-201ENST00000437445 219 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL358232.1-201ENST00000448030 501 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 APOOP2-201ENST00000461561 539 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 RPL30P9-201ENST00000465586 330 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 RPL31P58-201ENST00000469001 379 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 MTND6P6-201ENST00000478031 263 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 OR4G11P-201ENST00000492842 939 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 RN7SKP283-201ENST00000517197 270 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 MIR5684-201ENST00000585074 65 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC012065.4-201ENST00000602445 679 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL592436.1-201ENST00000605135 558 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC012360.2-201ENST00000609349 391 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC004009.2-201ENST00000623016 728 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 AC022031.1-201ENST00000585985 2593 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms