Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OR5BN1P-201ENST00000532955 829 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 SNRPGP16-201ENST00000533275 226 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 CR383656.14-201ENST00000551951 406 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 SERPINE4P-201ENST00000554978 281 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.59□□□□□ -1.99
VCX3BQ9H321 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.59□□□□□ -1.99
VCX3BQ9H321 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 VN1R7P-201ENST00000619242 903 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VCX3BQ9H321 AC079597.1-201ENST00000624306 508 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 AC016717.3-201ENST00000624730 554 ntBASIC2.59□□□□□ -1.99
VCX3BQ9H321 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.59□□□□□ -1.99
VCX3BQ9H321 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.59□□□□□ -2
VCX3BQ9H321 OR5BR1P-201ENST00000524992 1330 ntBASIC2.59□□□□□ -2
VCX3BQ9H321 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VCX3BQ9H321 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
VCX3BQ9H321 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCX3BQ9H321 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCX3BQ9H321 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
VCX3BQ9H321 CASKP1-201ENST00000412870 582 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.58□□□□□ -2
VCX3BQ9H321 Z85994.2-201ENST00000434327 452 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC005019.1-201ENST00000436455 431 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.58□□□□□ -2
VCX3BQ9H321 RNF2P1-201ENST00000442955 1010 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AL121871.1-201ENST00000443413 436 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.58□□□□□ -2
VCX3BQ9H321 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC073522.1-201ENST00000483312 377 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC090543.1-201ENST00000492168 485 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC002456.2-201ENST00000509356 380 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 RN7SKP283-201ENST00000517197 270 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.58□□□□□ -2
VCX3BQ9H321 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.58□□□□□ -2
VCX3BQ9H321 AC084033.1-201ENST00000550830 633 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 GTF2IP22-201ENST00000554443 182 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC090666.1-201ENST00000578241 445 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 NRBF2P5-201ENST00000603087 788 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 RPL23AP92-201ENST00000603609 255 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AL645944.1-201ENST00000603857 493 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AC013244.1-201ENST00000604279 193 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 AL355365.1-201ENST00000616480 294 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 MIR3651-201ENST00000630427 90 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
VCX3BQ9H321 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCX3BQ9H321 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCX3BQ9H321 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VCX3BQ9H321 OR5H2-201ENST00000355273 945 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 RNU5D-1-201ENST00000363299 116 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.57□□□□□ -2
VCX3BQ9H321 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VCX3BQ9H321 RNU4-47P-201ENST00000410876 114 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 RNU6-193P-201ENST00000410977 107 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 USP9YP27-201ENST00000418455 438 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 MORF4L1P6-201ENST00000418771 268 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.57□□□□□ -2
VCX3BQ9H321 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.57□□□□□ -2
VCX3BQ9H321 OR4K11P-201ENST00000431829 904 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.57□□□□□ -2
VCX3BQ9H321 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.57□□□□□ -2
VCX3BQ9H321 RPL23AP31-201ENST00000456160 467 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 RPL27AP5-201ENST00000469428 449 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.57□□□□□ -2
VCX3BQ9H321 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
VCX3BQ9H321 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
VCX3BQ9H321 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.57□□□□□ -2
VCX3BQ9H321 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.57□□□□□ -2
VCX3BQ9H321 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.57□□□□□ -2
VCX3BQ9H321 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.57□□□□□ -2
VCX3BQ9H321 AC123904.3-201ENST00000547218 814 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.57□□□□□ -2
VCX3BQ9H321 AMZ2P1-203ENST00000565833 850 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 ISCA1P3-201ENST00000577104 373 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
VCX3BQ9H321 MIR4658-201ENST00000584344 65 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 OR1M4P-201ENST00000589199 287 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 AC022916.3-201ENST00000592961 742 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 NTAN1P1-201ENST00000603150 646 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 AC135803.1-201ENST00000608748 565 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.57□□□□□ -2
VCX3BQ9H321 MIR6830-201ENST00000636015 70 ntBASIC2.57□□□□□ -2
VCX3BQ9H321 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.56□□□□□ -2
VCX3BQ9H321 AC096644.4-201ENST00000563417 2912 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms