Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC072052.1-201ENST00000496556 306 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 KCTD9P5-201ENST00000504141 1170 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 HIGD1AP3-201ENST00000515857 278 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 HSPA8P13-201ENST00000523715 472 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 ELOCP31-201ENST00000540463 467 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC011611.1-201ENST00000552179 197 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 HSPE1P3-201ENST00000559254 309 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 AC018638.8-201ENST00000588755 281 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC006116.10-201ENST00000591836 581 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AL596327.1-201ENST00000603629 213 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AL442067.1-201ENST00000613261 223 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC108479.2-201ENST00000617314 601 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS11Q9H270 7SK.10-201ENST00000621414 298 ntBASIC4.81□□□□□ -1.64
VPS11Q9H270 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS11Q9H270 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS11Q9H270 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS11Q9H270 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS11Q9H270 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS11Q9H270 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 SNORA51.1-201ENST00000363243 140 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RNY3P3-201ENST00000363816 102 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RNA5SP428-201ENST00000365129 132 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC016769.3-201ENST00000396562 315 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 ARF4P3-201ENST00000397387 509 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC025750.1-201ENST00000399891 379 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 EIF5P1-201ENST00000400019 1231 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AL049693.1-201ENST00000402760 611 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 HDGFP1-201ENST00000405943 252 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RNA5SP345-201ENST00000410646 108 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RNU6-195P-201ENST00000411352 109 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AL139128.1-201ENST00000413921 941 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RPS7P15-201ENST00000415804 584 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RPL31P45-201ENST00000419532 356 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AL353193.1-201ENST00000421444 268 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AL353678.1-201ENST00000422735 741 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RHOT1P3-201ENST00000436571 331 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 MTND6P13-201ENST00000443510 523 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 RPL29P29-201ENST00000448725 423 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 CEACAMP6-201ENST00000452007 574 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC091564.1-201ENST00000464563 479 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 ACTR3P3-201ENST00000480448 893 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC017037.1-201ENST00000508460 471 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS11Q9H270 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 IGLVIV-53-201ENST00000520107 367 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 AC022878.1-201ENST00000530684 149 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS11Q9H270 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 AC093249.1-201ENST00000567049 203 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 OR1F2P-201ENST00000570470 933 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 RN7SL176P-201ENST00000580352 264 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS11Q9H270 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 RNU6-88P-201ENST00000606801 100 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC009318.4-201ENST00000620496 486 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS11Q9H270 U6.101-201ENST00000637707 76 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VPS11Q9H270 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
VPS11Q9H270 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS11Q9H270 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS11Q9H270 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS11Q9H270 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS11Q9H270 THAP12P4-201ENST00000528321 2266 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms