Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC110754.1-201ENST00000399740 601 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 DNAJC19P6-201ENST00000401853 280 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AL590290.1-201ENST00000405336 380 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 RNU2-71P-201ENST00000411395 189 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 RPL7P8-201ENST00000411964 730 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 AC011242.1-201ENST00000433596 1158 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 NF1P3-201ENST00000457709 450 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 EIF5A2P1-201ENST00000564027 460 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 MIR4446-201ENST00000578505 67 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 VN1R78P-201ENST00000597393 564 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 AC009159.1-201ENST00000618386 642 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AC006249.1-201ENST00000621223 471 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 AC010297.1-201ENST00000623948 149 ntBASIC2.91□□□□□ -1.94
TRIM4Q9C037 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM4Q9C037 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
TRIM4Q9C037 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM4Q9C037 SNORA71.1-201ENST00000364523 117 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AL353692.2-201ENST00000407054 335 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 MYL8P-204ENST00000431574 518 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC090525.1-201ENST00000479116 478 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 RN7SL297P-201ENST00000483161 293 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC008413.1-201ENST00000511864 177 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 Y_RNA.676-201ENST00000516393 96 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 RN7SKP277-201ENST00000516895 283 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 RN7SKP272-201ENST00000516988 232 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 CYCSP41-201ENST00000616920 296 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 SNHG22-203ENST00000617833 660 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 FO624990.1-201ENST00000636373 85 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AP002907.1-201ENST00000606361 1430 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC073055.1-201ENST00000456901 1621 ntBASIC2.9□□□□□ -1.95
TRIM4Q9C037 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 SRIP2-201ENST00000428470 166 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM4Q9C037 VDAC1P3-201ENST00000434069 851 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC105272.1-201ENST00000438604 198 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 AL135938.1-201ENST00000443141 297 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC096992.1-201ENST00000459808 709 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 MIR6864-201ENST00000617935 70 ntBASIC2.89□□□□□ -1.95
TRIM4Q9C037 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TRIM4Q9C037 OR1S2-201ENST00000302592 978 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 SNORA70B-201ENST00000384210 135 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 RNU6-31P-201ENST00000384388 108 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 MIR504-201ENST00000385065 83 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 SNORD67-201ENST00000390833 111 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AL355379.1-201ENST00000405542 640 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 RNU2-21P-201ENST00000410368 188 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC244098.2-201ENST00000422068 99 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 NUP35P1-201ENST00000422734 947 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC016696.1-201ENST00000446949 318 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms