Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 PHKBP1-201ENST00000450951 1951 ntBASIC4.73□□□□□ -1.65
SALL3Q9BXA9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SALL3Q9BXA9 AC019155.1-201ENST00000382242 574 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 HMGN1P14-201ENST00000412459 517 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 SNORA71B-202ENST00000439232 272 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MTND5P20-201ENST00000448677 143 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC104306.1-201ENST00000449702 371 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RPL23AP12-201ENST00000467573 473 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RPS3AP17-201ENST00000472594 777 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC069499.1-201ENST00000489433 509 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 UBA52P3-201ENST00000491303 382 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RPL9P6-201ENST00000492764 598 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 SNX5P1-201ENST00000505757 1041 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC117522.1-201ENST00000509821 380 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC022483.1-201ENST00000514020 567 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC124947.2-202ENST00000552735 133 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC136618.2-201ENST00000575091 400 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AP001004.1-201ENST00000582468 324 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC072046.2-201ENST00000618366 268 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 CR381653.2-201ENST00000624041 768 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AP002001.2-201ENST00000529025 1469 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC093311.1-201ENST00000506586 2021 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 SUGT1P1-201ENST00000379514 476 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL139098.1-201ENST00000407291 389 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 USP9YP6-201ENST00000413550 854 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC114814.2-201ENST00000419195 485 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC009237.2-201ENST00000421358 284 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RPL21P109-201ENST00000422213 475 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC009965.2-201ENST00000425328 970 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MTND3P23-201ENST00000431980 347 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC092427.1-201ENST00000439177 601 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MTATP6P30-201ENST00000443540 664 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 USP9YP34-201ENST00000453983 808 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 KLF3P2-201ENST00000465138 268 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL121769.1-201ENST00000469473 401 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC110792.1-201ENST00000491826 472 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 MTCO1P35-201ENST00000515270 228 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AP001189.2-201ENST00000527320 189 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC006960.3-201ENST00000561845 705 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 AL137849.1-201ENST00000604767 169 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 RNU6-88P-201ENST00000606801 100 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 DUXAP9-208ENST00000622815 614 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 FP236240.3-201ENST00000623061 327 ntBASIC4.72□□□□□ -1.65
SALL3Q9BXA9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.72□□□□□ -1.65
SALL3Q9BXA9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.71□□□□□ -1.65
SALL3Q9BXA9 AC107982.1-201ENST00000507171 1300 ntBASIC4.71□□□□□ -1.65
SALL3Q9BXA9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SALL3Q9BXA9 CDR1-202ENST00000625883 1485 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 RN7SKP226-201ENST00000364912 300 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms