Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU6-348P-201ENST00000384386 107 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 CCNG1P1-201ENST00000406783 885 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 RPS3AP3-201ENST00000411933 242 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC009480.2-201ENST00000422916 432 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC006548.1-201ENST00000427470 102 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 MTND4LP10-201ENST00000435146 291 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC009220.1-201ENST00000451614 275 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC234775.1-201ENST00000454247 670 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 KLF3P2-201ENST00000465138 268 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 TMEM248P1-201ENST00000510579 951 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC100770.1-201ENST00000532310 322 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 CR383656.7-201ENST00000548164 174 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS1Q99742 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPAS1Q99742 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 MIR4277-201ENST00000578298 84 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 MIR3682-201ENST00000581338 84 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 RPL7P50-201ENST00000600588 727 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC068790.3-201ENST00000602988 553 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC073648.5-201ENST00000603502 305 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC011468.4-201ENST00000603942 409 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AL136363.2-201ENST00000604173 851 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC121334.2-201ENST00000605387 271 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 Z98200.1-201ENST00000607298 470 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC104010.1-201ENST00000616889 150 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPAS1Q99742 CR381572.1-201ENST00000625098 102 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 MIR7641-1-201ENST00000627518 61 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 MAPK10-253ENST00000641010 4072 ntBASIC3.99□□□□□ -1.77
NPAS1Q99742 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS1Q99742 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NPAS1Q99742 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS1Q99742 AC095050.2-201ENST00000510748 1458 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 AC022893.2-201ENST00000564832 3296 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPAS1Q99742 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.98□□□□□ -1.77
NPAS1Q99742 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 RNU6-114P-201ENST00000384704 105 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RNU6-192P-201ENST00000391253 100 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPS3AP36-201ENST00000398190 775 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPS4XP9-201ENST00000405151 780 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.98□□□□□ -1.77
NPAS1Q99742 VDAC1P9-201ENST00000412766 841 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 FAR2P2-201ENST00000413041 594 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 FAR2P4-202ENST00000425399 584 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC016712.1-201ENST00000431088 378 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPS6P12-201ENST00000432491 726 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPL23AP52-201ENST00000439311 478 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AL022238.1-201ENST00000442557 355 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.98□□□□□ -1.77
NPAS1Q99742 RPL17P49-201ENST00000443728 411 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 ELOCP30-201ENST00000447108 299 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPL23AP24-201ENST00000458203 385 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 SNORD108-201ENST00000459332 71 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 RPL35AP15-201ENST00000468042 339 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC011276.1-201ENST00000469688 323 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 AC139783.2-201ENST00000504847 1145 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.98□□□□□ -1.77
NPAS1Q99742 MTND4LP31-201ENST00000514859 294 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 SNORA18.6-201ENST00000516792 115 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.98□□□□□ -1.77
NPAS1Q99742 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS1Q99742 AC126177.3-201ENST00000551839 688 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 SETP7-201ENST00000552169 453 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC079587.1-201ENST00000603846 277 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC090948.1-201ENST00000607464 549 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC098614.4-201ENST00000607601 462 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS1Q99742 AL589743.7-201ENST00000612637 233 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC007546.1-201ENST00000619452 559 ntBASIC3.98□□□□□ -1.77
NPAS1Q99742 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPAS1Q99742 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms