Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC010493.1-201ENST00000513479 292 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 RAB9BP1-201ENST00000519581 626 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AP003181.2-201ENST00000528941 181 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 ELOCP31-201ENST00000540463 467 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 PDCD5P1-201ENST00000543528 309 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL845331.3-202ENST00000562856 261 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC006116.10-201ENST00000591836 581 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC008737.2-201ENST00000599446 118 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC123786.2-201ENST00000603459 275 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 TPTEP1-208ENST00000636884 213 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 NMD3P1-201ENST00000439704 1488 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC024560.2-201ENST00000507981 1497 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC066616.2-201ENST00000559334 1481 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR369-201ENST00000362155 70 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-462P-201ENST00000362659 105 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.146-201ENST00000363549 102 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-532P-201ENST00000384318 107 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-1160P-201ENST00000384546 104 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 SNORD116-23-201ENST00000384645 92 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AL354719.1-201ENST00000406535 843 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR548P-201ENST00000408336 84 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-1068P-201ENST00000410958 103 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-1148P-201ENST00000410992 104 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RN7SKP216-201ENST00000411050 312 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RPS7P15-201ENST00000415804 584 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 SNRPEP10-201ENST00000420249 274 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 PIGFP2-201ENST00000421400 651 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC018630.2-202ENST00000422992 927 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL23AP1-201ENST00000428990 471 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AL365400.1-201ENST00000431854 640 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RPS20P1-201ENST00000434853 354 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL23AP16-201ENST00000441715 421 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC132479.1-201ENST00000449160 144 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 MEMO1P3-201ENST00000459811 302 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-150P-201ENST00000516237 95 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-445P-201ENST00000516949 107 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AP003467.2-201ENST00000520175 319 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AP000827.1-201ENST00000527814 258 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC090312.1-201ENST00000580637 348 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 HMGB2P1-201ENST00000591146 634 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AL355802.3-201ENST00000607571 545 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC105429.2-201ENST00000610567 517 ntBASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP1Q96SZ6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 AC007823.1-201ENST00000569932 1566 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-492P-201ENST00000363035 104 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.166-201ENST00000363730 102 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU1-32P-201ENST00000363937 159 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 SUGT1P1-201ENST00000379514 476 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU4-31P-201ENST00000384211 141 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-185P-201ENST00000384421 107 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-225P-201ENST00000384613 103 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.579-201ENST00000390939 94 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 AL445669.1-201ENST00000426743 755 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 MTCO3P21-201ENST00000430791 643 ntBASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP1Q96SZ6 AC108059.2-201ENST00000434626 151 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms