Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 POLR3GP2-201ENST00000588366 668 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 uc_338.15-201ENST00000615470 191 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC040168.1-201ENST00000623594 991 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC012618.3-205ENST00000637896 1496 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 Z95331.1-201ENST00000623075 23112 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AL031119.1-201ENST00000404707 1879 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 AC023421.1-201ENST00000590535 1785 ntBASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD1Q96NR3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTCHD1Q96NR3 TAB3P1-202ENST00000452645 1634 ntBASIC4.9□□□□□ -1.62
PTCHD1Q96NR3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
PTCHD1Q96NR3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTCHD1Q96NR3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTCHD1Q96NR3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 U3.3-201ENST00000362986 216 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RNVU1-3-201ENST00000364313 161 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 SNORD42.2-201ENST00000365570 69 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 OR1L6-202ENST00000373684 1044 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 U3.29-201ENST00000391296 212 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AL359634.1-202ENST00000404721 284 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RPL31P2-201ENST00000413849 377 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 OR6C66P-201ENST00000414917 930 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RPS15AP40-201ENST00000419621 391 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AL590609.2-201ENST00000421430 368 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 BEND7P1-201ENST00000422058 457 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 Z95327.1-201ENST00000446082 482 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC090804.1-201ENST00000448870 490 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MTND1P9-201ENST00000453775 944 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC130509.1-201ENST00000464158 433 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RNU6-513P-201ENST00000516104 104 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 RNA5SP503-201ENST00000517047 117 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 SNORA25.17-201ENST00000517184 124 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MIR4424-201ENST00000585257 86 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AP001330.4-201ENST00000604350 154 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AL022099.1-201ENST00000604551 712 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC011626.1-201ENST00000604710 562 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC109780.1-201ENST00000451768 1344 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 AC244517.1-201ENST00000606030 2086 ntBASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD1Q96NR3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 MIR369-201ENST00000362155 70 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 SNORA63C-201ENST00000364578 129 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.301-201ENST00000364990 103 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.422-201ENST00000384054 114 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 RNU6-474P-201ENST00000384243 107 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.530-201ENST00000384587 101 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 MIR105-2-201ENST00000385083 81 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 MIR589-201ENST00000385238 99 ntBASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTCHD1Q96NR3 SNORA68.2-201ENST00000391263 128 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms