Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 RPS27AP1-201ENST00000475545 471 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 RPS4XP22-201ENST00000480755 780 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC008427.1-201ENST00000503102 655 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC074250.1-201ENST00000511117 192 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC027309.2-201ENST00000520566 192 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC015917.1-201ENST00000579654 510 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AL355810.1-201ENST00000614629 552 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC231759.1-201ENST00000616455 597 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 MIR7975-201ENST00000619350 68 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC43Q96MW1 AF117829.1-206ENST00000621883 3802 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 MFSD8-245ENST00000641743 948 ntBASIC3.77□□□□□ -1.81
CCDC43Q96MW1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 Z99496.1-201ENST00000469424 1477 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 ANKRD36P1-201ENST00000344424 659 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 U3.19-201ENST00000390893 196 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC017079.2-201ENST00000416102 485 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 RPS15AP6-201ENST00000420703 385 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC012065.2-201ENST00000421295 375 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 PTP4A1P7-201ENST00000423476 514 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 DPRXP1-201ENST00000426312 460 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 RPL23AP82-202ENST00000427528 469 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC097713.2-201ENST00000430199 356 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 MTND4LP10-201ENST00000435146 291 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 VN1R10P-201ENST00000447106 875 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 MTND2P19-201ENST00000449129 1012 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC104978.1-201ENST00000449387 391 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 HMGB3P8-201ENST00000449709 577 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 RN7SL601P-201ENST00000471221 293 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC012181.1-201ENST00000479895 423 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC020893.1-201ENST00000502452 580 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 KLRA1P-201ENST00000503499 986 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC069306.1-201ENST00000507006 843 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AP001330.4-201ENST00000604350 154 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AL360181.4-201ENST00000621752 134 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC109454.4-201ENST00000623411 649 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC110801.1-201ENST00000623590 212 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC095031.1-201ENST00000623685 672 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 MIR7153-201ENST00000637758 57 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 AC058791.1-201ENST00000608412 3198 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
CCDC43Q96MW1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC43Q96MW1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 SNORD65.1-201ENST00000390889 71 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 RPS7P13-201ENST00000413955 498 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 LUZP4P1-201ENST00000415420 344 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 USP9YP21-201ENST00000420603 432 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 MTCO1P3-201ENST00000429327 192 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 snoU109.4-201ENST00000458953 143 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC087312.1-201ENST00000471411 480 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 RN7SL442P-201ENST00000473804 320 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 OR4G11P-201ENST00000492842 939 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC093663.1-201ENST00000497190 394 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 SUMO2P5-201ENST00000506790 245 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 KLHL2P1-201ENST00000508691 521 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC026412.2-201ENST00000512270 1075 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AP001189.2-201ENST00000527320 189 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 SNRPGP16-201ENST00000533275 226 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 PDCL2P2-201ENST00000533651 189 ntBASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC43Q96MW1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms