Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC061975.8-201ENST00000587058 721 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 MIR486-1-201ENST00000612171 68 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AL390240.1-201ENST00000612950 384 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 AL590099.1-201ENST00000615276 138 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC079228.1-201ENST00000624774 1049 ntBASIC4.15□□□□□ -1.75
SKA1Q96BD8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SKA1Q96BD8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
SKA1Q96BD8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SKA1Q96BD8 AC007256.1-201ENST00000392253 2765 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 Y_RNA.234-201ENST00000364409 97 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 RNU6-83P-201ENST00000384568 112 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 RNU6-757P-201ENST00000410334 100 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 TPT1P2-201ENST00000413105 503 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC017083.1-201ENST00000428093 483 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 Z80107.1-201ENST00000436830 412 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 SETP5-201ENST00000437270 562 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 VN1R34P-201ENST00000447387 883 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 ANKRD26P4-201ENST00000455755 950 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 RPL7P9-201ENST00000468715 747 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC034244.1-201ENST00000507687 207 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC239860.2-201ENST00000525886 270 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 OR4K8P-201ENST00000578842 1048 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 MIR4429-201ENST00000580105 73 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL353997.4-201ENST00000586196 166 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL391001.1-201ENST00000602747 715 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC013444.2-201ENST00000603317 787 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AL596327.1-201ENST00000603629 213 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC092354.2-201ENST00000607786 514 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC128687.2-201ENST00000609657 566 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC023510.2-201ENST00000622162 746 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SKA1Q96BD8 MTCO1P9-201ENST00000505577 1534 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 AC011477.1-204ENST00000623416 1325 ntBASIC4.14□□□□□ -1.75
SKA1Q96BD8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SKA1Q96BD8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AL161912.2-201ENST00000565707 3007 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SKA1Q96BD8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 MIR423-201ENST00000362201 94 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 RNU6-157P-201ENST00000383957 107 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 RNU6-328P-201ENST00000390887 106 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AL583835.1-201ENST00000399570 407 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 CYCSP19-201ENST00000411715 316 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC007390.1-201ENST00000415722 356 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 SSXP9-201ENST00000417503 292 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC083875.1-201ENST00000419509 405 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AL159169.1-201ENST00000421119 127 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 RPL7P23-201ENST00000493874 747 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 ARL2BPP6-201ENST00000512757 439 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC105185.1-201ENST00000518705 535 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 DUXAP1-201ENST00000556632 463 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 MIR3158-1-201ENST00000583596 81 ntBASIC4.13□□□□□ -1.75
SKA1Q96BD8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.13□□□□□ -1.75
SKA1Q96BD8 AP002826.1-201ENST00000608835 315 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms