Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL391156.1-201ENST00000554965 554 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL450270.1-201ENST00000606160 391 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 MIR1264-201ENST00000616374 69 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL109620.1-201ENST00000618738 1197 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 Y_RNA.110-201ENST00000363220 99 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL034374.1-201ENST00000406329 351 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL357078.2-201ENST00000416486 427 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 NDUFA5P10-201ENST00000432147 357 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 MTND2P2-201ENST00000434633 945 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 MTND2P6-201ENST00000455337 1030 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 RNU7-27P-201ENST00000459281 62 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 OR4R2P-201ENST00000530815 597 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC026741.1-201ENST00000605892 482 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC005021.1-201ENST00000608730 355 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC069234.5-201ENST00000611056 416 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AC145207.9-201ENST00000623802 325 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 AL161431.1-201ENST00000618966 4205 ntBASIC2.67□□□□□ -1.98
SHROOM3Q8TF72 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 SNORD114-30-201ENST00000364448 72 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 UBE2V1P6-201ENST00000430840 422 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AL035551.1-201ENST00000446931 348 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 RPS3P1-201ENST00000456781 192 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 CD24P2-201ENST00000565486 219 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AC016727.1-205ENST00000605437 569 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AC092184.1-201ENST00000625042 715 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.66□□□□□ -1.98
SHROOM3Q8TF72 SNORD51.1-201ENST00000365405 77 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 RNU6-225P-201ENST00000384613 103 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 FAT1P1-201ENST00000406588 507 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 MIR1289-2-201ENST00000408360 111 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC009963.1-201ENST00000417265 157 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 RPL36AP6-201ENST00000435770 321 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AL353705.4-201ENST00000449661 238 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 RNA5SP385-201ENST00000515947 110 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 OR8X1P-201ENST00000534542 869 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 YWHAZP1-201ENST00000556286 722 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC005776.1-201ENST00000603164 290 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AL356274.1-201ENST00000617064 410 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AC009452.1-201ENST00000640823 606 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 AL445437.1-201ENST00000623157 3087 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 OR4G2P-202ENST00000641004 1759 ntBASIC2.65□□□□□ -1.98
SHROOM3Q8TF72 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 RNU4-7P-201ENST00000364758 141 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC008571.1-201ENST00000467232 300 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC132942.1-201ENST00000486753 483 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 HMGB1P46-201ENST00000520062 610 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 MIR5092-201ENST00000583139 88 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AL158211.2-201ENST00000607282 395 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 AC010338.1-201ENST00000621823 717 ntBASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
SHROOM3Q8TF72 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 MAPK10-322ENST00000641485 4530 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms