Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 WASF1P1-201ENST00000447560 1131 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 DPPA3P1-201ENST00000448050 469 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC107626.1-201ENST00000471084 183 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 OR5H5P-201ENST00000503164 928 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC117522.3-201ENST00000507974 584 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 HPRT1P1-201ENST00000509498 657 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 RNU1-95P-201ENST00000516357 160 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 SNORA70.18-201ENST00000516696 98 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 RNU1-128P-201ENST00000516704 160 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP364-201ENST00000516938 78 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC092868.3-201ENST00000560515 784 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC023824.2-201ENST00000566185 400 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 MIR4277-201ENST00000578298 84 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 APOOP1-201ENST00000604695 592 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 SNORD14A-201ENST00000606526 91 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 MIR6867-201ENST00000610636 67 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AL162373.1-201ENST00000620433 407 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AC127502.3-201ENST00000636170 1206 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 AL359851.1-201ENST00000569460 4997 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 CENPCP1-201ENST00000533085 2578 ntBASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPTSSBQ8NFR3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 RNU1-100P-201ENST00000365255 165 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 RNU6-851P-201ENST00000384565 107 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 U3.20-201ENST00000390909 217 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL445529.1-201ENST00000398713 389 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 SNORD23.1-201ENST00000408212 104 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 RNA5SP120-201ENST00000410900 112 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 OR8G2P-201ENST00000412796 908 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 DBIP2-201ENST00000419076 262 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL035423.1-201ENST00000420331 213 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC079355.1-201ENST00000421770 223 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC011242.1-201ENST00000433596 1158 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL513043.1-201ENST00000439124 535 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC009296.1-201ENST00000443146 155 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC114755.5-201ENST00000447760 831 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC126182.1-201ENST00000478134 357 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC090255.1-201ENST00000495779 349 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC093853.1-201ENST00000515689 483 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 RN7SKP283-201ENST00000517197 270 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC068339.2-201ENST00000534395 618 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC018630.1-201ENST00000541376 925 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 CR383656.6-201ENST00000550518 394 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL355836.1-201ENST00000555951 870 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 MTCO1P40-201ENST00000574371 625 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 MIR3616-201ENST00000584070 92 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC008749.1-201ENST00000597650 306 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC025588.4-201ENST00000615802 908 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AL590410.1-201ENST00000617925 333 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 AC098657.3-201ENST00000620434 263 ntBASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTSSBQ8NFR3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 MTND4P1-201ENST00000457501 1466 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 AC234772.1-201ENST00000377927 937 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 MIR192-201ENST00000384915 110 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 MIR550A3-201ENST00000390735 95 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 CYCSP19-201ENST00000411715 316 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 AC099677.1-201ENST00000420575 175 ntBASIC1.45□□□□□ -2.18
SPTSSBQ8NFR3 AC079780.1-201ENST00000428259 207 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms