Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL157700.1-201ENST00000561973 1432 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDB1Q86U70 RNU6-28P-201ENST00000362378 107 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 RNU1-18P-201ENST00000363062 164 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 RPL7P60-201ENST00000397636 735 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MIR1183-201ENST00000408856 89 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB1Q86U70 AC127526.1-201ENST00000417526 366 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 PTP4A1P5-201ENST00000420305 455 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AL593851.1-201ENST00000426171 157 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 SDCBPP1-201ENST00000440192 890 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MTND5P14-201ENST00000441481 1267 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AL591503.2-201ENST00000442314 1005 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 Z95327.1-201ENST00000446082 482 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.73□□□□□ -1.81
LDB1Q86U70 BTF3P5-201ENST00000457252 467 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 RN7SL93P-201ENST00000463035 293 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB1Q86U70 AC078918.1-201ENST00000498515 228 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB1Q86U70 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB1Q86U70 COX7A2P2-201ENST00000505291 250 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB1Q86U70 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB1Q86U70 HSPE1P23-201ENST00000509838 286 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MTCYBP43-201ENST00000513621 740 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB1Q86U70 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB1Q86U70 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC087499.8-201ENST00000578406 226 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MIR4286-201ENST00000580651 93 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB1Q86U70 VN1R90P-201ENST00000595717 726 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 BBIP1P1-201ENST00000602999 279 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC128687.1-201ENST00000605304 619 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC018638.7-201ENST00000605836 1114 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AL390208.1-201ENST00000605885 644 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC011816.2-201ENST00000607089 556 ntBASIC3.73□□□□□ -1.81
LDB1Q86U70 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB1Q86U70 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.73□□□□□ -1.81
LDB1Q86U70 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
LDB1Q86U70 AL356131.1-201ENST00000405826 414 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB1Q86U70 RPL21P109-201ENST00000422213 475 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC011233.1-201ENST00000422812 283 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 MTND4P20-201ENST00000424125 869 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB1Q86U70 BX322784.1-201ENST00000455793 1077 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 RPS4XP10-201ENST00000465034 731 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 RPS3AP22-201ENST00000488297 769 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC023424.2-201ENST00000493479 777 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.72□□□□□ -1.81
LDB1Q86U70 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB1Q86U70 IGKV2D-23-201ENST00000518179 286 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 COX6CP8-201ENST00000522620 226 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AP004371.1-201ENST00000525240 214 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.72□□□□□ -1.81
LDB1Q86U70 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC008751.2-201ENST00000597885 980 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AL020997.2-201ENST00000602607 184 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC024560.3-201ENST00000608482 349 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AL360219.1-201ENST00000610230 366 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AC019226.2-201ENST00000625973 424 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB1Q86U70 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.72□□□□□ -1.81
LDB1Q86U70 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LDB1Q86U70 AC087359.1-201ENST00000508335 1740 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LDB1Q86U70 AC024560.2-201ENST00000507981 1497 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AL049780.3-201ENST00000624612 1583 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LDB1Q86U70 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
LDB1Q86U70 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.71□□□□□ -1.81
LDB1Q86U70 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.71□□□□□ -1.81
LDB1Q86U70 AC011477.1-204ENST00000623416 1325 ntBASIC3.71□□□□□ -1.81
LDB1Q86U70 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 RPL21P132-201ENST00000331267 462 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 Y_RNA.18-201ENST00000362461 102 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AC245052.5-201ENST00000416320 649 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AC234781.2-201ENST00000426370 994 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 RPL7P2-201ENST00000427639 268 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms