Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC016745.2-201ENST00000608834 3443 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 Y_RNA.555-201ENST00000384673 110 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-550P-201ENST00000391057 101 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 BX682237.1-201ENST00000415016 335 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 CYCSP6-201ENST00000434498 302 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC016696.1-201ENST00000446949 318 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC104073.1-201ENST00000451988 151 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AL133244.1-201ENST00000456007 258 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 RPS23P2-201ENST00000463671 415 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC005912.1-201ENST00000495392 255 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC009901.1-201ENST00000506703 541 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 Y_RNA.680-201ENST00000516441 93 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 RN7SKP66-201ENST00000516681 231 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 IGLV3-24-201ENST00000517477 197 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 RANP3-201ENST00000530970 276 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AC005899.2-201ENST00000584353 90 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 RNA5SP439-201ENST00000617595 124 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 U6.104-201ENST00000637979 90 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 ZNF33CP-201ENST00000432492 2030 ntBASIC6.37□□□□□ -1.39
SH3RF1Q7Z6J0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC010615.1-201ENST00000594254 1764 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 PWAR1-201ENST00000624188 2414 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AL121886.1-201ENST00000358609 435 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 Y_RNA.2-201ENST00000362330 96 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 Y_RNA.485-201ENST00000384395 102 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 DBIP1-201ENST00000401435 260 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC069218.2-201ENST00000411665 344 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AL450023.1-201ENST00000450868 751 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 SNORD97-201ENST00000459187 142 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 FTH1P2-201ENST00000466086 412 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC104472.2-201ENST00000469035 601 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AP002812.1-201ENST00000495378 474 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 RPL23AP55-201ENST00000498163 452 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC010350.1-201ENST00000504908 231 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 TBCAP3-201ENST00000512475 312 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 SCARNA16.2-201ENST00000516520 172 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-798P-201ENST00000516912 103 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 MRPS21P7-201ENST00000566937 238 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC006254.3-201ENST00000603353 884 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 Z98751.3-201ENST00000604447 521 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC096772.1-201ENST00000609146 564 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 AC132068.1-201ENST00000623805 459 ntBASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.36□□□□□ -1.39
SH3RF1Q7Z6J0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6-188P-201ENST00000364207 107 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RNA5SP30-201ENST00000365552 115 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RNU5E-6P-201ENST00000365574 115 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.35□□□□□ -1.39
SH3RF1Q7Z6J0 AC234779.1-201ENST00000425910 285 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms